Be careful if you're going to use the phenolic spacer. It's OK to torque the long center bolts to spec but the tabs on either end of the upper intake are not strong at all. Without the rigid aluminum lower to back it up, one or both tabs can crack away from upper.When using the spacer, it is better to snug up the two short bolts (front and rear) lightly and not go to full torque. Sealer on the gaskets should take care of any potential leaks.
Noise could be throttle valve, IAC or vacuum leak. Check for upper intake cracking as noted above - also possible before adding the spacer. Check the PCV on the back of the lower. Grommet can get hardened with age and leak.
Thanks for the info. I haven't started it up again yet (trying to chase down an oil pressure issue that I'm pretty confident is the sender but need to resolve before firing it up again).
In any case, I've swapped the IAC from the 3.0 since it's the same part and appeared at least cosmetically to be in better condition. Once the oil pressure issue is resolved I'll test fire it to see if the IAC fixed it. If not, I'll try running it for a minute or so without the serpentine belt so I can eliminate some noise sources. That will also make it easier to use carb cleaner to locate an intake leak. I did check each of the vacuum supply points and capping them off didn't eliminate the noise.
The PCV grommet appeared in good condition when I was assembling the engine. I put a bit of RTV on it to seal it securely on the intake, and installed a new valve.
Also ordered an EGR spacer since that was the reason the intake spacer didn't get installed originally. If the upper has to come off to resolve this, I'll be careful with tightening the bolts.
Thanks again for all the suggestions.