@Keno1
You have options for the top end:
1) perform a "Parade Rest" teardown of the valve train, determine the survivability of the push rods a rocker, if they are good, use them.
2) a) replacement push rods are over the counter, however, if after the rebuild your dimensions ∆, then Smith Brothers offer custom length, both adjustable and solid push rods.
2) b) Delta Cam of Tacoma Washington offers the only improved rockers available; they have gardened inserts.
3) it is a non adjustable valve train so the adjustable push rods, for a few dollars more are a SUPER value.
4) another option is to have a set of Ford 2.9l adjustable rockers machined fir use in the OHV 4.0l. It is reasonably simple, 6 of them need to be milled something like 1mm (I forget the actual measurement

).
5) after the rocker arms are thoroughly cleaned, drill the oil passages 1 Machinist's drill bit size larger (rockers too), put a bevell on the cut surfaces and buff. This will result in improved top end oiling.
6) the springs on the rocker arms can be replaced with spacers; this will permit the rockers to move freely, resulting in very slick sliding top end components.
As
@franklin2 mentioned, depending on the condition of those heads/valve seats, they may need to be reground (if your lucky), can be part of a performance valve job ..)
I hope that your heads are OK, If have two sets of good, serviceable used 4.0 heads so far, so they exist


On our information page there is a hyperlink to Sven Pruett's "How to Build and make Power with the Ford 60°V6". It is ABSOLUTELY worth reading! It covers everything that I've mentioned and much more.
PS, if those cylinders have cross hatching, you have one answer.
-The over size of the piston is marked in the center on top.
-the reason for the low compression cylinder should rear it's ugly head soon.