Swapping to a different engine and transmission is easier said than done.
If you're going for cheap and easy, and other 2.9L to put into it's place from the j/y would be exactly that. Reliability is always in question no matter what used engine you get. You shouldn't be to worried about it either, I would assume the heads on your current 2.9L are good, so you could swap parts if something were to happen in that aspect.
Hell, my brother's distributored 3.0L has only 80K on it and it started squealing like a pig. He pulled the dis and the gear was half way ground off. Nothing is bullet proof. He's in the same boat as you, but he opted to rebuild it. Spent a ton of money on it. I told him to just get one from the j/y and call it a day and be done with it.
If an engine is going to fail catastrophically, it usually pretty obvious. My 2.9L died at 98K due to cracked heads/worn out bearings, and it got me home at least 10 miles knocking the whole way.
IMO
Pete